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Table 2 Quality tested items

From: Overview: an iPS cell stock at CiRA

Status

Test item

Method

Criteria

Release assay

Morphology

Microscopy

ES cell-like

HLA

PCR-SBT

Match with origin

STR

PCR and capillary electrophoresis

Match with origin

Bacteriology

BacT/ALERT

Negative

Viral testing

PCR

Negative

Endotoxin

Kinetic turbidimetric

≦ 5 EU/mL

Mycoplasma

PCR

Negative

Reference assay

Pluripotent marker expression

Flow cytometry

–

Microarray

–

SNV/Indel

WGS/WES

–

CNV

WGS/SNP array

–

Analysis of genetic variation

WGS

 

Karyotype

Conventional Giemsa staining

–

G-banding

–

Residual vector

PCR (Taqman qPCR)

–

Cell number and viability immediately after thawing

Cell count

–

Average of doubling time among 3 passages of subculture

Cell count

–

Cell number and viability after 6–7 days culture of thawed cells

Cell count

–

  1. A release assay is defined as mandatory testing that must be carried out before shipping. A reference assay is defined as an important test for which the criteria cannot be standardized, but the results may delay the product release if any abnormality is identified